Reference Atlas :: Allen Brain Atlas: Mouse Brain
Sagittal Atlas : 21 sagittal sections spaced at 200 µm intervals and annotated for 71 major brain regions identified at the top level(s) of the brain structure hierarchal tree
Spatial atlas of the mouse central nervous system at molecular ...
2023年9月27日 · Single-cell RNA sequencing has profiled molecular cell types in the mouse brain 1, 2, but cannot capture their spatial organization. Here we used an in situ sequencing method, STARmap PLUS 3,...
Mouse Brain Atlas - gaidi.ca
The mouse brain in stereotaxic coordinates: hard cover edition. Access Online via Elsevier, 2001. A tool by Matt Gaidica
Developmental mouse brain common coordinate framework
2024年10月21日 · Here, we generated a developmental common coordinate framework (DevCCF) for mouse brains with expert-curated 3D segmentations at seven ages: embryonic day (E)11.5, E13.5, E15.5, E18.5, postnatal...
Reference Atlas :: Allen Brain Atlas: Developing Mouse Brain
The Allen Developing Mouse Brain Atlas includes a full-color, high-resolution anatomic reference atlas at seven timepoints accompanied by a systematic developmental taxonomy of mouse brain structures. In 2013, the reference atlas was updated to provide a deeper level of annotation.
Molecularly defined and spatially resolved cell atlas of the whole ...
2023年12月13日 · Here we imaged a panel of more than 1,100 genes in approximately 10 million cells across the entire adult mouse brains using multiplexed error-robust fluorescence in situ hybridization 12 and...
Molecular atlas of the adult mouse brain | Science Advances
2020年6月26日 · To generate a spatial classification of the adult mouse brain based exclusively on molecular patterns, we analyzed the ST gene expression data by performing dimensionality reduction and clustering. We performed dimensionality reduction using the top 50% variable genes by applying an independent component analysis [JADE ICA ]. Each independent ...
The Allen Mouse Brain Common Coordinate Framework: A 3D …
2020年5月14日 · Here, we present the Allen Mouse Brain Common Coordinate Framework (CCFv3) as such a resource. We constructed an average template brain at 10 μm voxel resolution by interpolating high resolution in-plane serial two-photon tomography images with 100 μm z-sampling from 1,675 young adult C57BL/6J mice.
Digital Brain CEBSIT(ION)
This is a color-coded atlas for longitudinal axis of hippocampus, including 348 coronal and 832 sagittal sections with the whole range of hippocampus. The longitudinal coordinates are shown in the left side with color-coded.
A Cellular Resolution Spatial Transcriptomic Landscape of the …
2022年5月17日 · We report a high-resolution spatial transcriptomic atlas of sagittal sections from the P7 mouse brain using Stereo-seq. This dataset enables the exploration of the spatial gene expression patterns of 27,330 genes across the medial structures near the midline of the postnatal mouse brain.
- 某些结果已被删除